Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubfd1Q78JW9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Gm7029-201ENSMUST00000173226 450 ntBASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Snora73a-201ENSMUST00000082453 205 ntBASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubfd1Q78JW9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms