Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Gm15547-201ENSMUST00000122152 333 ntBASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Mir6927-201ENSMUST00000184494 71 ntBASIC15.02■□□□□ -0
Ddx55Q6ZPL9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ddx55Q6ZPL9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx55Q6ZPL9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Gm25732-201ENSMUST00000175168 60 ntBASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Gm27046-201ENSMUST00000182160 463 ntBASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Gm8099-201ENSMUST00000200510 742 ntBASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Daam2-202ENSMUST00000224595 1926 ntBASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx55Q6ZPL9 Gm5846-201ENSMUST00000193146 1414 ntBASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Gm14263-201ENSMUST00000117955 746 ntBASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Gm14109-201ENSMUST00000118814 309 ntBASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Gm8908-201ENSMUST00000121633 1024 ntBASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Gm34767-201ENSMUST00000191813 1062 ntBASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Gm38092-201ENSMUST00000195600 653 ntBASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15□□□□□ -0.01
Ddx55Q6ZPL9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms