Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Gm37986-201ENSMUST00000193285 383 ntBASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Gm19208-201ENSMUST00000213861 912 ntBASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Gm32025-201ENSMUST00000217960 307 ntBASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Snrnp40Q6PE01 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm23270-201ENSMUST00000104055 131 ntBASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm14028-201ENSMUST00000117434 479 ntBASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm15276-201ENSMUST00000145953 498 ntBASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm38317-201ENSMUST00000195564 343 ntBASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Snrnp40Q6PE01 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gm14130-201ENSMUST00000118417 987 ntBASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gm11978-201ENSMUST00000122315 466 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms