Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf220Q6PDX6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Mir3113-201ENSMUST00000175478 76 ntBASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Gm27741-201ENSMUST00000185060 237 ntBASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rnf220Q6PDX6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gm12882-201ENSMUST00000121696 517 ntBASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gm11025-201ENSMUST00000140773 466 ntBASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rnf220Q6PDX6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms