Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.81□□□□□ -0.84
Ss18Q62280 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Ss18Q62280 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.81□□□□□ -0.84
Ss18Q62280 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Ss18Q62280 Gm12585-201ENSMUST00000117307 290 ntBASIC9.81□□□□□ -0.84
Ss18Q62280 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Ss18Q62280 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.81□□□□□ -0.84
Ss18Q62280 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.81□□□□□ -0.84
Ss18Q62280 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.81□□□□□ -0.84
Ss18Q62280 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.81□□□□□ -0.84
Ss18Q62280 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ss18Q62280 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ss18Q62280 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.81□□□□□ -0.84
Ss18Q62280 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Ss18Q62280 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ss18Q62280 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ss18Q62280 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ss18Q62280 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ss18Q62280 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ss18Q62280 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.8□□□□□ -0.84
Ss18Q62280 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Gm5939-201ENSMUST00000119613 2874 ntBASIC9.8□□□□□ -0.84
Ss18Q62280 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.8□□□□□ -0.84
Ss18Q62280 Gm10327-201ENSMUST00000105222 1002 ntBASIC9.8□□□□□ -0.84
Ss18Q62280 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Ss18Q62280 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC9.8□□□□□ -0.84
Ss18Q62280 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.8□□□□□ -0.84
Ss18Q62280 Gm3436-201ENSMUST00000179930 840 ntBASIC9.8□□□□□ -0.84
Ss18Q62280 Gm27533-201ENSMUST00000183800 152 ntBASIC9.8□□□□□ -0.84
Ss18Q62280 Gm5069-202ENSMUST00000192714 1011 ntBASIC9.8□□□□□ -0.84
Ss18Q62280 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Ss18Q62280 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ss18Q62280 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.8□□□□□ -0.84
Ss18Q62280 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.8□□□□□ -0.84
Ss18Q62280 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ss18Q62280 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ss18Q62280 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ss18Q62280 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms