Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Six4Q61321 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.39□□□□□ -0.27
Six4Q61321 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.39□□□□□ -0.27
Six4Q61321 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.38□□□□□ -0.27
Six4Q61321 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Six4Q61321 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Six4Q61321 Gm11978-201ENSMUST00000122315 466 ntBASIC13.38□□□□□ -0.27
Six4Q61321 Gm10156-201ENSMUST00000122364 462 ntBASIC13.38□□□□□ -0.27
Six4Q61321 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.38□□□□□ -0.27
Six4Q61321 Gm24196-201ENSMUST00000179161 110 ntBASIC13.38□□□□□ -0.27
Six4Q61321 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.38□□□□□ -0.27
Six4Q61321 Gm17794-201ENSMUST00000220252 955 ntBASIC13.38□□□□□ -0.27
Six4Q61321 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.38□□□□□ -0.27
Six4Q61321 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.38□□□□□ -0.27
Six4Q61321 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Six4Q61321 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six4Q61321 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.37□□□□□ -0.27
Six4Q61321 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.37□□□□□ -0.27
Six4Q61321 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.37□□□□□ -0.27
Six4Q61321 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.37□□□□□ -0.27
Six4Q61321 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.37□□□□□ -0.27
Six4Q61321 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Six4Q61321 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Gm16202-201ENSMUST00000117532 544 ntBASIC13.37□□□□□ -0.27
Six4Q61321 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.37□□□□□ -0.27
Six4Q61321 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.37□□□□□ -0.27
Six4Q61321 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Six4Q61321 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Six4Q61321 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six4Q61321 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.36□□□□□ -0.27
Six4Q61321 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Six4Q61321 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Six4Q61321 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.36□□□□□ -0.27
Six4Q61321 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Six4Q61321 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six4Q61321 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Six4Q61321 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.36□□□□□ -0.27
Six4Q61321 Gm11814-201ENSMUST00000119515 929 ntBASIC13.36□□□□□ -0.27
Six4Q61321 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms