Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm27533-201ENSMUST00000183800 152 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm27525-201ENSMUST00000184465 107 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm7774-201ENSMUST00000200064 533 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm46209-201ENSMUST00000217912 553 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm5779-201ENSMUST00000218467 910 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.68□□□□□ -0.38
Nr1h4Q60641 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.68□□□□□ -0.38
Nr1h4Q60641 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.67□□□□□ -0.38
Nr1h4Q60641 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nr1h4Q60641 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.66□□□□□ -0.38
Nr1h4Q60641 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.66□□□□□ -0.38
Nr1h4Q60641 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.66□□□□□ -0.38
Nr1h4Q60641 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Gm4995-201ENSMUST00000117247 432 ntBASIC12.66□□□□□ -0.38
Nr1h4Q60641 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Mir7221-201ENSMUST00000184009 72 ntBASIC12.66□□□□□ -0.38
Nr1h4Q60641 Gm27772-201ENSMUST00000184900 187 ntBASIC12.66□□□□□ -0.38
Nr1h4Q60641 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 AW822252-206ENSMUST00000208904 237 ntBASIC12.66□□□□□ -0.38
Nr1h4Q60641 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.66□□□□□ -0.38
Nr1h4Q60641 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nr1h4Q60641 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms