Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim38Q5SZ99 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.78□□□□□ -0.2
Trim38Q5SZ99 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Mir6977-201ENSMUST00000184960 64 ntBASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim38Q5SZ99 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim38Q5SZ99 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trim38Q5SZ99 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim38Q5SZ99 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim38Q5SZ99 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim38Q5SZ99 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim38Q5SZ99 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.77□□□□□ -0.2
Trim38Q5SZ99 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim38Q5SZ99 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Gm12341-201ENSMUST00000119724 503 ntBASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.77□□□□□ -0.21
Trim38Q5SZ99 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Auts2-212ENSMUST00000178555 309 ntBASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.77□□□□□ -0.21
Trim38Q5SZ99 Gm18307-201ENSMUST00000206864 949 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms