Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav3-3Q5R1C3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Gm8775-201ENSMUST00000170943 1327 ntBASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav3-3Q5R1C3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Gm13036-201ENSMUST00000117799 748 ntBASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Gm4899-201ENSMUST00000178708 719 ntBASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 AC084391.1-201ENSMUST00000200651 141 ntBASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3-3Q5R1C3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Trav3-3Q5R1C3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms