Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Gm1821-202ENSMUST00000227415 750 ntBASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps13aQ5H8C4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm14058-201ENSMUST00000116082 735 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm4862-201ENSMUST00000170405 438 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gzmn-202ENSMUST00000225535 989 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm6963-201ENSMUST00000147879 379 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm44329-201ENSMUST00000197469 112 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm3793-201ENSMUST00000204973 672 ntBASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps13aQ5H8C4 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Gm5904-201ENSMUST00000210286 865 ntBASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Vps13aQ5H8C4 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms