Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf20Q5DTM8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Gm6983-201ENSMUST00000214912 628 ntBASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf20Q5DTM8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm44397-201ENSMUST00000195950 113 ntBASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm42790-201ENSMUST00000201268 969 ntBASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf20Q5DTM8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf20Q5DTM8 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms