Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Gm15770-201ENSMUST00000117498 584 ntBASIC13.14□□□□□ -0.31
Scn2bQ56A07 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.14□□□□□ -0.31
Scn2bQ56A07 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Scn2bQ56A07 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.13□□□□□ -0.31
Scn2bQ56A07 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.13□□□□□ -0.31
Scn2bQ56A07 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn2bQ56A07 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.13□□□□□ -0.31
Scn2bQ56A07 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.13□□□□□ -0.31
Scn2bQ56A07 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm15321-201ENSMUST00000121290 288 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm12403-201ENSMUST00000121384 959 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Gm18905-201ENSMUST00000205454 928 ntBASIC13.12□□□□□ -0.31
Scn2bQ56A07 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Scn2bQ56A07 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn2bQ56A07 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms