Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm27552-201ENSMUST00000183351 62 ntBASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm27844-201ENSMUST00000183613 62 ntBASIC13.29□□□□□ -0.28
Fam196aQ3USH1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm44551-201ENSMUST00000208804 171 ntBASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fam196aQ3USH1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Gm16397-201ENSMUST00000122201 494 ntBASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fam196aQ3USH1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.27□□□□□ -0.28
Fam196aQ3USH1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Gm8584-201ENSMUST00000171982 758 ntBASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Gm6407-201ENSMUST00000176468 549 ntBASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Gm6458-201ENSMUST00000211573 635 ntBASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fam196aQ3USH1 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms