Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Spg11Q3UHA3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Mir6998-201ENSMUST00000183343 64 ntBASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Gm27627-201ENSMUST00000183644 150 ntBASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Gm37201-201ENSMUST00000191845 523 ntBASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Gm45398-201ENSMUST00000210561 165 ntBASIC12.11□□□□□ -0.47
Spg11Q3UHA3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Gm3619-201ENSMUST00000219947 775 ntBASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Spg11Q3UHA3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm14219-201ENSMUST00000120414 288 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm13022-201ENSMUST00000121181 285 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm23771-201ENSMUST00000178702 110 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm10731-201ENSMUST00000181171 448 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm32999-201ENSMUST00000192693 562 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm42657-201ENSMUST00000201746 211 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.1□□□□□ -0.47
Spg11Q3UHA3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Gm45598-202ENSMUST00000210719 986 ntBASIC12.09□□□□□ -0.47
Spg11Q3UHA3 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.09□□□□□ -0.47
Spg11Q3UHA3 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms