Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col5a2Q3U962 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.53■□□□□ 0.08
Col5a2Q3U962 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col5a2Q3U962 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Ntng1-201ENSMUST00000051253 327 ntBASIC15.52■□□□□ 0.08
Col5a2Q3U962 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col5a2Q3U962 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gm19353-201ENSMUST00000184561 445 ntBASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gm43058-201ENSMUST00000197645 625 ntBASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col5a2Q3U962 AC107638.1-201ENSMUST00000213690 1061 ntBASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gm18730-201ENSMUST00000218038 343 ntBASIC15.52■□□□□ 0.07
Col5a2Q3U962 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.52■□□□□ 0.07
Col5a2Q3U962 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gm10179-201ENSMUST00000086233 688 ntBASIC15.52■□□□□ 0.07
Col5a2Q3U962 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.52■□□□□ 0.07
Col5a2Q3U962 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col5a2Q3U962 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.51■□□□□ 0.07
Col5a2Q3U962 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Gm13611-201ENSMUST00000118269 318 ntBASIC15.51■□□□□ 0.07
Col5a2Q3U962 Gm8018-201ENSMUST00000173536 789 ntBASIC15.51■□□□□ 0.07
Col5a2Q3U962 Gm5070-201ENSMUST00000177599 862 ntBASIC15.51■□□□□ 0.07
Col5a2Q3U962 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.51■□□□□ 0.07
Col5a2Q3U962 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Gm19187-201ENSMUST00000206781 892 ntBASIC15.51■□□□□ 0.07
Col5a2Q3U962 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Gzmn-202ENSMUST00000225535 989 ntBASIC15.51■□□□□ 0.07
Col5a2Q3U962 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col5a2Q3U962 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.51■□□□□ 0.07
Col5a2Q3U962 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col5a2Q3U962 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col5a2Q3U962 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Col5a2Q3U962 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col5a2Q3U962 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms