Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Fndc4Q3TR08 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Fndc4Q3TR08 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Fndc4Q3TR08 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Fndc4Q3TR08 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.33□□□□□ -0.6
Fndc4Q3TR08 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.33□□□□□ -0.6
Fndc4Q3TR08 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Gm27321-201ENSMUST00000185021 205 ntBASIC11.32□□□□□ -0.6
Fndc4Q3TR08 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Mir497b-201ENSMUST00000093601 125 ntBASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fndc4Q3TR08 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms