Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Gm14767-201ENSMUST00000121559 586 ntBASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Gm20949-201ENSMUST00000206478 952 ntBASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim43aQ3TL54 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trim43aQ3TL54 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trim43aQ3TL54 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43aQ3TL54 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43aQ3TL54 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43aQ3TL54 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43aQ3TL54 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim43aQ3TL54 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Gm27618-201ENSMUST00000183671 60 ntBASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Mir8102-201ENSMUST00000184148 139 ntBASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43aQ3TL54 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim43aQ3TL54 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms