Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Gm38144-201ENSMUST00000192790 465 ntBASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Gm43094-201ENSMUST00000196549 921 ntBASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Gm9797-201ENSMUST00000052902 613 ntBASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.39□□□□□ -0.43
Trappc13Q3TIR1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Gm12151-201ENSMUST00000121374 290 ntBASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trappc13Q3TIR1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Gm11524-201ENSMUST00000119349 807 ntBASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Gm26464-201ENSMUST00000157094 305 ntBASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Gm24694-201ENSMUST00000180054 110 ntBASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Gm27663-201ENSMUST00000184839 110 ntBASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Gm19078-201ENSMUST00000206311 727 ntBASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trappc13Q3TIR1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trappc13Q3TIR1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trappc13Q3TIR1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms