Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Gm44913-201ENSMUST00000208060 2990 ntBASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Mmp14-206ENSMUST00000225641 3238 ntBASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ush2AQ2QI47 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm15746-201ENSMUST00000120684 1027 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm8100-201ENSMUST00000182906 988 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm37851-201ENSMUST00000193871 889 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm2566-201ENSMUST00000201267 431 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm13981-201ENSMUST00000122360 447 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm24328-201ENSMUST00000175104 67 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm37782-201ENSMUST00000194879 678 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 CT485606.1-201ENSMUST00000213187 878 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 CT030652.1-201ENSMUST00000227377 1235 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 AC133083.1-201ENSMUST00000221736 2209 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 AC101945.2-201ENSMUST00000227886 1377 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 AC108416.1-202ENSMUST00000228927 1201 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 AC121598.2-201ENSMUST00000228376 2325 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm12461-201ENSMUST00000120231 1239 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm15136-201ENSMUST00000120552 533 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm7069-201ENSMUST00000182418 1008 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm29651-201ENSMUST00000189088 697 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Ighv1-48-201ENSMUST00000191795 294 ntBASIC6.81□□□□□ -1.32
Ush2AQ2QI47 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC6.81□□□□□ -1.32
Ush2AQ2QI47 Gm13492-201ENSMUST00000119772 665 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms