Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc4Q08624 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm13786-201ENSMUST00000122371 333 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm3890-201ENSMUST00000182416 207 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm8099-201ENSMUST00000200510 742 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm32025-201ENSMUST00000217960 307 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.71□□□□□ -0.37
Hoxc4Q08624 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc4Q08624 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Hoxc4Q08624 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc4Q08624 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hoxc4Q08624 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hoxc4Q08624 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc4Q08624 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc4Q08624 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc4Q08624 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc4Q08624 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.7□□□□□ -0.38
Hoxc4Q08624 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.7□□□□□ -0.38
Hoxc4Q08624 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Snord83b-201ENSMUST00000104546 94 ntBASIC12.7□□□□□ -0.38
Hoxc4Q08624 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.7□□□□□ -0.38
Hoxc4Q08624 Mir6420-201ENSMUST00000185032 102 ntBASIC12.7□□□□□ -0.38
Hoxc4Q08624 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.7□□□□□ -0.38
Hoxc4Q08624 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.7□□□□□ -0.38
Hoxc4Q08624 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc4Q08624 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms