Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.06□□□□□ -0.64
Tff1Q08423 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Gm20445-201ENSMUST00000061905 565 ntBASIC11.06□□□□□ -0.64
Tff1Q08423 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Tff1Q08423 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Tff1Q08423 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Tff1Q08423 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.06□□□□□ -0.64
Tff1Q08423 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.06□□□□□ -0.64
Tff1Q08423 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Tff1Q08423 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tff1Q08423 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tff1Q08423 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Tff1Q08423 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Tff1Q08423 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.05□□□□□ -0.64
Tff1Q08423 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.05□□□□□ -0.64
Tff1Q08423 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tff1Q08423 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Tff1Q08423 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.05□□□□□ -0.64
Tff1Q08423 Gm12138-201ENSMUST00000122180 951 ntBASIC11.05□□□□□ -0.64
Tff1Q08423 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.05□□□□□ -0.64
Tff1Q08423 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tff1Q08423 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.05□□□□□ -0.64
Tff1Q08423 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.05□□□□□ -0.64
Tff1Q08423 Gm18018-201ENSMUST00000198273 408 ntBASIC11.05□□□□□ -0.64
Tff1Q08423 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.05□□□□□ -0.64
Tff1Q08423 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.05□□□□□ -0.64
Tff1Q08423 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.05□□□□□ -0.64
Tff1Q08423 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.05□□□□□ -0.64
Tff1Q08423 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tff1Q08423 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.05□□□□□ -0.64
Tff1Q08423 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Tff1Q08423 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Tff1Q08423 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.05□□□□□ -0.64
Tff1Q08423 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tff1Q08423 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tff1Q08423 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Tff1Q08423 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.04□□□□□ -0.64
Tff1Q08423 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Tff1Q08423 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.04□□□□□ -0.64
Tff1Q08423 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Gm15824-201ENSMUST00000119516 955 ntBASIC11.04□□□□□ -0.64
Tff1Q08423 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Tff1Q08423 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Tff1Q08423 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.04□□□□□ -0.64
Tff1Q08423 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.04□□□□□ -0.64
Tff1Q08423 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.04□□□□□ -0.64
Tff1Q08423 Gm9908-201ENSMUST00000211534 448 ntBASIC11.04□□□□□ -0.64
Tff1Q08423 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.04□□□□□ -0.64
Tff1Q08423 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tff1Q08423 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms