Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.36□□□□□ -0.27
Pfdn6Q03958 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.36□□□□□ -0.27
Pfdn6Q03958 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.36□□□□□ -0.27
Pfdn6Q03958 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pfdn6Q03958 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.35□□□□□ -0.27
Pfdn6Q03958 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pfdn6Q03958 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gm16215-201ENSMUST00000161990 637 ntBASIC13.34□□□□□ -0.27
Pfdn6Q03958 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.34□□□□□ -0.27
Pfdn6Q03958 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.34□□□□□ -0.27
Pfdn6Q03958 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pfdn6Q03958 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pfdn6Q03958 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms