Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm16202-201ENSMUST00000117532 544 ntBASIC13.25□□□□□ -0.29
Col6a2Q02788 Gm11618-201ENSMUST00000117946 267 ntBASIC13.25□□□□□ -0.29
Col6a2Q02788 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.25□□□□□ -0.29
Col6a2Q02788 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.25□□□□□ -0.29
Col6a2Q02788 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a2Q02788 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a2Q02788 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.25□□□□□ -0.29
Col6a2Q02788 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Col6a2Q02788 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.25□□□□□ -0.29
Col6a2Q02788 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col6a2Q02788 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Col6a2Q02788 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a2Q02788 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a2Q02788 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.25□□□□□ -0.29
Col6a2Q02788 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Col6a2Q02788 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col6a2Q02788 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.24□□□□□ -0.29
Col6a2Q02788 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Gm37922-201ENSMUST00000195596 455 ntBASIC13.24□□□□□ -0.29
Col6a2Q02788 Gm45841-201ENSMUST00000207700 164 ntBASIC13.24□□□□□ -0.29
Col6a2Q02788 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
Col6a2Q02788 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.24□□□□□ -0.29
Col6a2Q02788 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.24□□□□□ -0.29
Col6a2Q02788 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col6a2Q02788 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Col6a2Q02788 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a2Q02788 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a2Q02788 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.23□□□□□ -0.29
Col6a2Q02788 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.23□□□□□ -0.29
Col6a2Q02788 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm12384-201ENSMUST00000119228 919 ntBASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm8062-201ENSMUST00000139696 444 ntBASIC13.23□□□□□ -0.29
Col6a2Q02788 Snora78-201ENSMUST00000158630 128 ntBASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm4271-201ENSMUST00000174444 973 ntBASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.23□□□□□ -0.29
Col6a2Q02788 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm43630-201ENSMUST00000201550 776 ntBASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.23□□□□□ -0.29
Col6a2Q02788 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a2Q02788 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a2Q02788 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.23□□□□□ -0.29
Col6a2Q02788 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms