Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm24659-201ENSMUST00000180212 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm24169-201ENSMUST00000180244 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm23689-201ENSMUST00000180354 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Gm27359-201ENSMUST00000184153 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm27785-201ENSMUST00000184268 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm27466-201ENSMUST00000184396 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Gm27703-201ENSMUST00000184836 110 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Smn1P97801 Gm5779-201ENSMUST00000218467 910 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Smn1P97801 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.38□□□□□ -0.59
Smn1P97801 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Smn1P97801 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smn1P97801 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.37□□□□□ -0.59
Smn1P97801 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.37□□□□□ -0.59
Smn1P97801 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Smn1P97801 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smn1P97801 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Smn1P97801 Gm6912-201ENSMUST00000117218 544 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Gm15393-201ENSMUST00000120499 219 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Smn1P97801 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smn1P97801 Gm46209-201ENSMUST00000217912 553 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Gm9229-201ENSMUST00000222777 126 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Smn1P97801 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Smn1P97801 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smn1P97801 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.37□□□□□ -0.59
Smn1P97801 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Smn1P97801 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Smn1P97801 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smn1P97801 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.36□□□□□ -0.59
Smn1P97801 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smn1P97801 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Gm6415-201ENSMUST00000118488 348 ntBASIC11.36□□□□□ -0.59
Smn1P97801 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.36□□□□□ -0.59
Smn1P97801 Gm24420-201ENSMUST00000176676 59 ntBASIC11.36□□□□□ -0.59
Smn1P97801 Gm28630-201ENSMUST00000187806 498 ntBASIC11.36□□□□□ -0.59
Smn1P97801 Gm8000-201ENSMUST00000188378 592 ntBASIC11.36□□□□□ -0.59
Smn1P97801 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.36□□□□□ -0.59
Smn1P97801 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Smn1P97801 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Smn1P97801 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.36□□□□□ -0.59
Smn1P97801 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smn1P97801 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.36□□□□□ -0.59
Smn1P97801 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smn1P97801 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms