Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.46□□□□□ -0.57
Nkx3-1P97436 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.46□□□□□ -0.57
Nkx3-1P97436 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Gm6447-201ENSMUST00000118905 835 ntBASIC11.46□□□□□ -0.57
Nkx3-1P97436 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Gm16379-201ENSMUST00000161469 348 ntBASIC11.46□□□□□ -0.57
Nkx3-1P97436 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.46□□□□□ -0.57
Nkx3-1P97436 Gm8762-201ENSMUST00000193486 339 ntBASIC11.46□□□□□ -0.57
Nkx3-1P97436 Olfr284-202ENSMUST00000206647 966 ntBASIC11.46□□□□□ -0.57
Nkx3-1P97436 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-1P97436 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nkx3-1P97436 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-1P97436 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Nkx3-1P97436 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-1P97436 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-1P97436 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-1P97436 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-1P97436 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-1P97436 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.45□□□□□ -0.58
Nkx3-1P97436 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gm10608-202ENSMUST00000213924 676 ntBASIC11.45□□□□□ -0.58
Nkx3-1P97436 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gm24526-201ENSMUST00000082921 158 ntBASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.45□□□□□ -0.58
Nkx3-1P97436 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.45□□□□□ -0.58
Nkx3-1P97436 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.45□□□□□ -0.58
Nkx3-1P97436 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-1P97436 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx3-1P97436 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms