Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps45P97390 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps45P97390 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.74□□□□□ -0.21
Vps45P97390 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vps45P97390 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.74□□□□□ -0.21
Vps45P97390 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps45P97390 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Vps45P97390 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Vps45P97390 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Gm12928-201ENSMUST00000117115 573 ntBASIC13.74□□□□□ -0.21
Vps45P97390 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.74□□□□□ -0.21
Vps45P97390 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Vps45P97390 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Gm8652-201ENSMUST00000181363 964 ntBASIC13.74□□□□□ -0.21
Vps45P97390 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.74□□□□□ -0.21
Vps45P97390 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps45P97390 Gm6091-201ENSMUST00000098307 165 ntBASIC13.74□□□□□ -0.21
Vps45P97390 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps45P97390 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps45P97390 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps45P97390 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Vps45P97390 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Vps45P97390 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.73□□□□□ -0.21
Vps45P97390 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.73□□□□□ -0.21
Vps45P97390 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps45P97390 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.73□□□□□ -0.21
Vps45P97390 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Vps45P97390 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps45P97390 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps45P97390 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps45P97390 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vps45P97390 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.73□□□□□ -0.21
Vps45P97390 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Vps45P97390 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vps45P97390 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vps45P97390 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.72□□□□□ -0.21
Vps45P97390 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps45P97390 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms