Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim43bP86448 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Trim43bP86448 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.68□□□□□ -0.22
Trim43bP86448 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim43bP86448 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim43bP86448 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.68□□□□□ -0.22
Trim43bP86448 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.68□□□□□ -0.22
Trim43bP86448 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim43bP86448 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim43bP86448 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Trim43bP86448 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43bP86448 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43bP86448 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim43bP86448 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim43bP86448 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim43bP86448 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim43bP86448 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim43bP86448 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Gm21854-201ENSMUST00000179901 471 ntBASIC13.67□□□□□ -0.22
Trim43bP86448 Gm9522-201ENSMUST00000182394 926 ntBASIC13.67□□□□□ -0.22
Trim43bP86448 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim43bP86448 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.67□□□□□ -0.22
Trim43bP86448 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim43bP86448 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43bP86448 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim43bP86448 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim43bP86448 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.66□□□□□ -0.22
Trim43bP86448 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim43bP86448 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim43bP86448 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim43bP86448 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim43bP86448 Gm22189-201ENSMUST00000103822 86 ntBASIC13.66□□□□□ -0.22
Trim43bP86448 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim43bP86448 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim43bP86448 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.66□□□□□ -0.22
Trim43bP86448 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim43bP86448 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.66□□□□□ -0.22
Trim43bP86448 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim43bP86448 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43bP86448 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms