Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H3f3aP84244 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.83□□□□□ -0.52
H3f3aP84244 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.83□□□□□ -0.52
H3f3aP84244 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
H3f3aP84244 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3aP84244 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.83□□□□□ -0.52
H3f3aP84244 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H3f3aP84244 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.82□□□□□ -0.52
H3f3aP84244 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.82□□□□□ -0.52
H3f3aP84244 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.82□□□□□ -0.52
H3f3aP84244 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
H3f3aP84244 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Gm6447-201ENSMUST00000118905 835 ntBASIC11.82□□□□□ -0.52
H3f3aP84244 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.82□□□□□ -0.52
H3f3aP84244 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
H3f3aP84244 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
H3f3aP84244 Gm6244-201ENSMUST00000178732 841 ntBASIC11.82□□□□□ -0.52
H3f3aP84244 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.82□□□□□ -0.52
H3f3aP84244 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.82□□□□□ -0.52
H3f3aP84244 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.82□□□□□ -0.52
H3f3aP84244 Gm17794-201ENSMUST00000220252 955 ntBASIC11.82□□□□□ -0.52
H3f3aP84244 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.82□□□□□ -0.52
H3f3aP84244 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
H3f3aP84244 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
H3f3aP84244 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.82□□□□□ -0.52
H3f3aP84244 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
H3f3aP84244 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H3f3aP84244 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3aP84244 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.82□□□□□ -0.52
H3f3aP84244 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
H3f3aP84244 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.81□□□□□ -0.52
H3f3aP84244 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Mir1894-201ENSMUST00000122802 81 ntBASIC11.81□□□□□ -0.52
H3f3aP84244 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.81□□□□□ -0.52
H3f3aP84244 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.81□□□□□ -0.52
H3f3aP84244 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.81□□□□□ -0.52
H3f3aP84244 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.81□□□□□ -0.52
H3f3aP84244 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H3f3aP84244 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.81□□□□□ -0.52
H3f3aP84244 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
H3f3aP84244 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.81□□□□□ -0.52
H3f3aP84244 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
H3f3aP84244 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3aP84244 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms