Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CiitaP79621 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Gm42693-201ENSMUST00000196779 631 ntBASIC14.36□□□□□ -0.11
CiitaP79621 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.36□□□□□ -0.11
CiitaP79621 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CiitaP79621 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.35□□□□□ -0.11
CiitaP79621 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Gm22018-201ENSMUST00000104357 131 ntBASIC14.35□□□□□ -0.11
CiitaP79621 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.35□□□□□ -0.11
CiitaP79621 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.35□□□□□ -0.11
CiitaP79621 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Gm25261-201ENSMUST00000157416 134 ntBASIC14.35□□□□□ -0.11
CiitaP79621 Gm17420-201ENSMUST00000164753 153 ntBASIC14.35□□□□□ -0.11
CiitaP79621 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CiitaP79621 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CiitaP79621 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.35□□□□□ -0.11
CiitaP79621 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.35□□□□□ -0.11
CiitaP79621 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.35□□□□□ -0.11
CiitaP79621 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CiitaP79621 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CiitaP79621 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.34□□□□□ -0.11
CiitaP79621 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CiitaP79621 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.34□□□□□ -0.11
CiitaP79621 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Mir1938-201ENSMUST00000158746 100 ntBASIC14.34□□□□□ -0.11
CiitaP79621 Gm18054-201ENSMUST00000207539 555 ntBASIC14.34□□□□□ -0.11
CiitaP79621 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.34□□□□□ -0.11
CiitaP79621 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.34□□□□□ -0.11
CiitaP79621 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CiitaP79621 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CiitaP79621 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CiitaP79621 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.34□□□□□ -0.11
CiitaP79621 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.34□□□□□ -0.11
CiitaP79621 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.34□□□□□ -0.11
CiitaP79621 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CiitaP79621 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CiitaP79621 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.33□□□□□ -0.11
CiitaP79621 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CiitaP79621 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.33□□□□□ -0.11
CiitaP79621 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CiitaP79621 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms