Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cxcr4P70658 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcr4P70658 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.48□□□□□ -0.41
Cxcr4P70658 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Cxcr4P70658 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.48□□□□□ -0.41
Cxcr4P70658 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcr4P70658 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.48□□□□□ -0.41
Cxcr4P70658 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcr4P70658 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.47□□□□□ -0.41
Cxcr4P70658 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.47□□□□□ -0.41
Cxcr4P70658 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Cxcr4P70658 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cxcr4P70658 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.47□□□□□ -0.41
Cxcr4P70658 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cxcr4P70658 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Cxcr4P70658 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.47□□□□□ -0.41
Cxcr4P70658 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cxcr4P70658 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.47□□□□□ -0.41
Cxcr4P70658 Gm37917-201ENSMUST00000194711 392 ntBASIC12.47□□□□□ -0.41
Cxcr4P70658 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Gm17795-201ENSMUST00000214505 757 ntBASIC12.47□□□□□ -0.41
Cxcr4P70658 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.47□□□□□ -0.41
Cxcr4P70658 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cxcr4P70658 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.47□□□□□ -0.41
Cxcr4P70658 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.47□□□□□ -0.41
Cxcr4P70658 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cxcr4P70658 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.47□□□□□ -0.41
Cxcr4P70658 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.47□□□□□ -0.41
Cxcr4P70658 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcr4P70658 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Gm15678-201ENSMUST00000117573 960 ntBASIC12.46□□□□□ -0.41
Cxcr4P70658 Gm13385-201ENSMUST00000121089 220 ntBASIC12.46□□□□□ -0.41
Cxcr4P70658 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.46□□□□□ -0.41
Cxcr4P70658 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.46□□□□□ -0.41
Cxcr4P70658 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Gm15823-201ENSMUST00000064305 670 ntBASIC12.46□□□□□ -0.41
Cxcr4P70658 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cxcr4P70658 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcr4P70658 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms