Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Shox2P70390 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.1□□□□□ -0.31
Shox2P70390 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.1□□□□□ -0.31
Shox2P70390 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.1□□□□□ -0.31
Shox2P70390 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shox2P70390 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shox2P70390 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.09□□□□□ -0.31
Shox2P70390 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shox2P70390 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Shox2P70390 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.09□□□□□ -0.31
Shox2P70390 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Shox2P70390 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shox2P70390 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.09□□□□□ -0.31
Shox2P70390 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Gm13385-201ENSMUST00000121089 220 ntBASIC13.09□□□□□ -0.31
Shox2P70390 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.09□□□□□ -0.31
Shox2P70390 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.09□□□□□ -0.31
Shox2P70390 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.09□□□□□ -0.31
Shox2P70390 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Shox2P70390 Gm20553-201ENSMUST00000204205 844 ntBASIC13.09□□□□□ -0.31
Shox2P70390 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.09□□□□□ -0.31
Shox2P70390 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.09□□□□□ -0.31
Shox2P70390 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Shox2P70390 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shox2P70390 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Shox2P70390 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Shox2P70390 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.09□□□□□ -0.31
Shox2P70390 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.09□□□□□ -0.31
Shox2P70390 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shox2P70390 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shox2P70390 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shox2P70390 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shox2P70390 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shox2P70390 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shox2P70390 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Shox2P70390 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Shox2P70390 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Shox2P70390 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.08□□□□□ -0.32
Shox2P70390 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.08□□□□□ -0.32
Shox2P70390 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.08□□□□□ -0.32
Shox2P70390 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Shox2P70390 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Shox2P70390 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.08□□□□□ -0.32
Shox2P70390 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.08□□□□□ -0.32
Shox2P70390 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shox2P70390 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shox2P70390 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.07□□□□□ -0.32
Shox2P70390 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Shox2P70390 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms