Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cux2P70298 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cux2P70298 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cux2P70298 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cux2P70298 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cux2P70298 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cux2P70298 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cux2P70298 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cux2P70298 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cux2P70298 Gm23153-201ENSMUST00000175323 313 ntBASIC21.28■■□□□ 1
Cux2P70298 Gm4482-201ENSMUST00000200876 742 ntBASIC21.28■■□□□ 1
Cux2P70298 CT485607.1-201ENSMUST00000216100 85 ntBASIC21.28■■□□□ 1
Cux2P70298 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC21.28■■□□□ 1
Cux2P70298 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cux2P70298 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cux2P70298 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cux2P70298 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cux2P70298 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cux2P70298 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cux2P70298 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Cux2P70298 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cux2P70298 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cux2P70298 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cux2P70298 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC21.27■■□□□ 1
Cux2P70298 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC21.27■■□□□ 1
Cux2P70298 Gm37246-201ENSMUST00000192665 835 ntBASIC21.27■■□□□ 1
Cux2P70298 Gm18038-201ENSMUST00000197900 485 ntBASIC21.27■■□□□ 1
Cux2P70298 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cux2P70298 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cux2P70298 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cux2P70298 Gm5525-201ENSMUST00000190438 1312 ntBASIC21.27■□□□□ 0.99
Cux2P70298 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cux2P70298 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC21.27■□□□□ 0.99
Cux2P70298 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cux2P70298 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cux2P70298 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cux2P70298 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cux2P70298 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cux2P70298 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cux2P70298 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cux2P70298 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cux2P70298 Gm12314-201ENSMUST00000118104 538 ntBASIC21.26■□□□□ 0.99
Cux2P70298 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cux2P70298 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cux2P70298 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Cux2P70298 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cux2P70298 AC133602.1-201ENSMUST00000227510 509 ntBASIC21.26■□□□□ 0.99
Cux2P70298 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cux2P70298 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cux2P70298 Mir339-201ENSMUST00000083659 96 ntBASIC21.26■□□□□ 0.99
Cux2P70298 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cux2P70298 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cux2P70298 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cux2P70298 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cux2P70298 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC21.26■□□□□ 0.99
Cux2P70298 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cux2P70298 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC21.26■□□□□ 0.99
Cux2P70298 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cux2P70298 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cux2P70298 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cux2P70298 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cux2P70298 Mir1901-201ENSMUST00000122616 78 ntBASIC21.25■□□□□ 0.99
Cux2P70298 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC21.25■□□□□ 0.99
Cux2P70298 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC21.25■□□□□ 0.99
Cux2P70298 Gm3671-201ENSMUST00000182463 1007 ntBASIC21.25■□□□□ 0.99
Cux2P70298 Gm34023-201ENSMUST00000195539 217 ntBASIC21.25■□□□□ 0.99
Cux2P70298 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC21.25■□□□□ 0.99
Cux2P70298 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cux2P70298 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
Cux2P70298 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cux2P70298 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Cux2P70298 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cux2P70298 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC21.24■□□□□ 0.99
Cux2P70298 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cux2P70298 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cux2P70298 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cux2P70298 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cux2P70298 Gm45133-201ENSMUST00000207548 2773 ntBASIC21.24■□□□□ 0.99
Cux2P70298 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.24■□□□□ 0.99
Cux2P70298 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cux2P70298 Gm25880-201ENSMUST00000104331 132 ntBASIC21.24■□□□□ 0.99
Cux2P70298 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cux2P70298 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC21.24■□□□□ 0.99
Cux2P70298 Gm12196-201ENSMUST00000120954 262 ntBASIC21.24■□□□□ 0.99
Cux2P70298 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cux2P70298 Mir7221-201ENSMUST00000184009 72 ntBASIC21.24■□□□□ 0.99
Cux2P70298 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC21.24■□□□□ 0.99
Cux2P70298 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cux2P70298 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms