Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Stra8P70278 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC18.35■□□□□ 0.53
Stra8P70278 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.35■□□□□ 0.53
Stra8P70278 Gm4875-201ENSMUST00000118257 786 ntBASIC18.35■□□□□ 0.53
Stra8P70278 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.35■□□□□ 0.53
Stra8P70278 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Stra8P70278 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Stra8P70278 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stra8P70278 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Stra8P70278 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC18.34■□□□□ 0.53
Stra8P70278 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Gm44414-201ENSMUST00000203660 2109 ntBASIC18.34■□□□□ 0.53
Stra8P70278 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.34■□□□□ 0.53
Stra8P70278 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC18.34■□□□□ 0.53
Stra8P70278 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC18.34■□□□□ 0.53
Stra8P70278 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Stra8P70278 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.34■□□□□ 0.53
Stra8P70278 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.34■□□□□ 0.53
Stra8P70278 Gm21470-201ENSMUST00000187680 696 ntBASIC18.34■□□□□ 0.53
Stra8P70278 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.34■□□□□ 0.53
Stra8P70278 AC131997.1-201ENSMUST00000228611 1229 ntBASIC18.34■□□□□ 0.53
Stra8P70278 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Stra8P70278 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stra8P70278 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC18.33■□□□□ 0.53
Stra8P70278 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stra8P70278 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stra8P70278 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Stra8P70278 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stra8P70278 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stra8P70278 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stra8P70278 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stra8P70278 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.33■□□□□ 0.52
Stra8P70278 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.33■□□□□ 0.52
Stra8P70278 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.33■□□□□ 0.52
Stra8P70278 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Stra8P70278 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Stra8P70278 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Stra8P70278 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Stra8P70278 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Stra8P70278 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra8P70278 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Stra8P70278 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra8P70278 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra8P70278 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Stra8P70278 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Stra8P70278 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra8P70278 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Stra8P70278 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra8P70278 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra8P70278 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC18.32■□□□□ 0.52
Stra8P70278 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Stra8P70278 Gm15678-201ENSMUST00000117573 960 ntBASIC18.32■□□□□ 0.52
Stra8P70278 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.32■□□□□ 0.52
Stra8P70278 Gm15487-201ENSMUST00000122373 465 ntBASIC18.32■□□□□ 0.52
Stra8P70278 Mir8102-201ENSMUST00000184148 139 ntBASIC18.32■□□□□ 0.52
Stra8P70278 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.32■□□□□ 0.52
Stra8P70278 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.32■□□□□ 0.52
Stra8P70278 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.32■□□□□ 0.52
Stra8P70278 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra8P70278 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.32■□□□□ 0.52
Stra8P70278 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms