Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PrkcbP68404 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
PrkcbP68404 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.34□□□□□ -0.11
PrkcbP68404 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.34□□□□□ -0.11
PrkcbP68404 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.34□□□□□ -0.11
PrkcbP68404 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PrkcbP68404 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PrkcbP68404 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PrkcbP68404 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PrkcbP68404 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PrkcbP68404 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PrkcbP68404 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.33□□□□□ -0.11
PrkcbP68404 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.33□□□□□ -0.11
PrkcbP68404 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PrkcbP68404 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PrkcbP68404 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PrkcbP68404 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Gm12957-201ENSMUST00000117835 377 ntBASIC14.33□□□□□ -0.12
PrkcbP68404 Gm8805-201ENSMUST00000117848 313 ntBASIC14.33□□□□□ -0.12
PrkcbP68404 Gm1335-201ENSMUST00000121653 386 ntBASIC14.33□□□□□ -0.12
PrkcbP68404 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.33□□□□□ -0.12
PrkcbP68404 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Gm27682-201ENSMUST00000183930 110 ntBASIC14.33□□□□□ -0.12
PrkcbP68404 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.33□□□□□ -0.12
PrkcbP68404 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
PrkcbP68404 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PrkcbP68404 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
PrkcbP68404 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.33□□□□□ -0.12
PrkcbP68404 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.33□□□□□ -0.12
PrkcbP68404 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PrkcbP68404 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PrkcbP68404 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.32□□□□□ -0.12
PrkcbP68404 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.32□□□□□ -0.12
PrkcbP68404 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.32□□□□□ -0.12
PrkcbP68404 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.32□□□□□ -0.12
PrkcbP68404 Gm12742-201ENSMUST00000117326 410 ntBASIC14.32□□□□□ -0.12
PrkcbP68404 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.32□□□□□ -0.12
PrkcbP68404 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PrkcbP68404 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
PrkcbP68404 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.32□□□□□ -0.12
PrkcbP68404 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.32□□□□□ -0.12
PrkcbP68404 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PrkcbP68404 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PrkcbP68404 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms