Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Lsm6P62313 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Lsm6P62313 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.67□□□□□ -0.54
Lsm6P62313 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm6P62313 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lsm6P62313 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.66□□□□□ -0.54
Lsm6P62313 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.66□□□□□ -0.54
Lsm6P62313 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.66□□□□□ -0.54
Lsm6P62313 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Lsm6P62313 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.66□□□□□ -0.54
Lsm6P62313 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm6P62313 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lsm6P62313 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lsm6P62313 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.65□□□□□ -0.54
Lsm6P62313 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Lsm6P62313 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.65□□□□□ -0.54
Lsm6P62313 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.65□□□□□ -0.54
Lsm6P62313 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.65□□□□□ -0.54
Lsm6P62313 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Lsm6P62313 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.65□□□□□ -0.54
Lsm6P62313 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.65□□□□□ -0.54
Lsm6P62313 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Lsm6P62313 Mir7654-201ENSMUST00000185082 70 ntBASIC11.65□□□□□ -0.54
Lsm6P62313 Gm10576-201ENSMUST00000191927 825 ntBASIC11.65□□□□□ -0.54
Lsm6P62313 Gm37917-201ENSMUST00000194711 392 ntBASIC11.65□□□□□ -0.54
Lsm6P62313 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.65□□□□□ -0.54
Lsm6P62313 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.65□□□□□ -0.54
Lsm6P62313 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.65□□□□□ -0.54
Lsm6P62313 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.65□□□□□ -0.54
Lsm6P62313 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Lsm6P62313 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm6P62313 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms