Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nphp4P59240 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nphp4P59240 AC122314.1-201ENSMUST00000223056 2239 ntBASIC17.78■□□□□ 0.44
Nphp4P59240 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nphp4P59240 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.77■□□□□ 0.44
Nphp4P59240 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Gm44891-201ENSMUST00000208817 2223 ntBASIC17.77■□□□□ 0.44
Nphp4P59240 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.77■□□□□ 0.44
Nphp4P59240 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.77■□□□□ 0.44
Nphp4P59240 Gm25668-201ENSMUST00000157700 129 ntBASIC17.77■□□□□ 0.44
Nphp4P59240 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC17.77■□□□□ 0.44
Nphp4P59240 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Gm5904-201ENSMUST00000210286 865 ntBASIC17.77■□□□□ 0.44
Nphp4P59240 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC17.77■□□□□ 0.44
Nphp4P59240 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.77■□□□□ 0.44
Nphp4P59240 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC17.77■□□□□ 0.44
Nphp4P59240 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.77■□□□□ 0.44
Nphp4P59240 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Nphp4P59240 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nphp4P59240 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nphp4P59240 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nphp4P59240 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nphp4P59240 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nphp4P59240 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nphp4P59240 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nphp4P59240 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.77■□□□□ 0.43
Nphp4P59240 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nphp4P59240 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.76■□□□□ 0.43
Nphp4P59240 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nphp4P59240 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC17.76■□□□□ 0.43
Nphp4P59240 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.76■□□□□ 0.43
Nphp4P59240 AC167013.1-201ENSMUST00000228592 202 ntBASIC17.76■□□□□ 0.43
Nphp4P59240 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nphp4P59240 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nphp4P59240 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC17.75■□□□□ 0.43
Nphp4P59240 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Nphp4P59240 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Nphp4P59240 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Gm29199-201ENSMUST00000187766 775 ntBASIC17.75■□□□□ 0.43
Nphp4P59240 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC17.75■□□□□ 0.43
Nphp4P59240 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.75■□□□□ 0.43
Nphp4P59240 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC17.75■□□□□ 0.43
Nphp4P59240 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Nphp4P59240 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Nphp4P59240 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Nphp4P59240 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Nphp4P59240 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nphp4P59240 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Nphp4P59240 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nphp4P59240 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC17.74■□□□□ 0.43
Nphp4P59240 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms