Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.57□□□□□ -0.24
Tubgcp3P58854 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubgcp3P58854 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.56□□□□□ -0.24
Tubgcp3P58854 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Gm29608-201ENSMUST00000190444 463 ntBASIC13.56□□□□□ -0.24
Tubgcp3P58854 Gm10576-201ENSMUST00000191927 825 ntBASIC13.56□□□□□ -0.24
Tubgcp3P58854 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.56□□□□□ -0.24
Tubgcp3P58854 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.56□□□□□ -0.24
Tubgcp3P58854 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.55□□□□□ -0.24
Tubgcp3P58854 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tubgcp3P58854 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.55□□□□□ -0.24
Tubgcp3P58854 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Gm19220-201ENSMUST00000222682 803 ntBASIC13.55□□□□□ -0.24
Tubgcp3P58854 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubgcp3P58854 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms