Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rrp1P56183 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp1P56183 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp1P56183 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rrp1P56183 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.98□□□□□ -0.01
Rrp1P56183 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.98□□□□□ -0.01
Rrp1P56183 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rrp1P56183 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.98□□□□□ -0.01
Rrp1P56183 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.98□□□□□ -0.01
Rrp1P56183 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.98□□□□□ -0.01
Rrp1P56183 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rrp1P56183 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rrp1P56183 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.98□□□□□ -0.01
Rrp1P56183 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Gm7775-201ENSMUST00000218871 853 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rrp1P56183 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.98□□□□□ -0.01
Rrp1P56183 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.98□□□□□ -0.01
Rrp1P56183 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.98□□□□□ -0.01
Rrp1P56183 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rrp1P56183 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Rrp1P56183 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Rrp1P56183 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.97□□□□□ -0.01
Rrp1P56183 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.97□□□□□ -0.01
Rrp1P56183 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rrp1P56183 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rrp1P56183 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rrp1P56183 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Gm17837-201ENSMUST00000186435 985 ntBASIC14.97□□□□□ -0.01
Rrp1P56183 Gm19931-201ENSMUST00000198920 368 ntBASIC14.97□□□□□ -0.01
Rrp1P56183 Gm17795-201ENSMUST00000214505 757 ntBASIC14.97□□□□□ -0.01
Rrp1P56183 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Gm5161-201ENSMUST00000075243 853 ntBASIC14.97□□□□□ -0.01
Rrp1P56183 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rrp1P56183 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rrp1P56183 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.97□□□□□ -0.01
Rrp1P56183 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rrp1P56183 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.97□□□□□ -0.01
Rrp1P56183 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rrp1P56183 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rrp1P56183 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rrp1P56183 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rrp1P56183 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rrp1P56183 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rrp1P56183 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rrp1P56183 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.96□□□□□ -0.01
Rrp1P56183 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rrp1P56183 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Rrp1P56183 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rrp1P56183 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms