Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TubP50586 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.62□□□□□ -0.23
TubP50586 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TubP50586 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
TubP50586 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TubP50586 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.62□□□□□ -0.23
TubP50586 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TubP50586 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.61□□□□□ -0.23
TubP50586 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.61□□□□□ -0.23
TubP50586 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TubP50586 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.61□□□□□ -0.23
TubP50586 Gm8652-201ENSMUST00000181363 964 ntBASIC13.61□□□□□ -0.23
TubP50586 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.61□□□□□ -0.23
TubP50586 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Gm45841-201ENSMUST00000207700 164 ntBASIC13.61□□□□□ -0.23
TubP50586 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TubP50586 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.61□□□□□ -0.23
TubP50586 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.61□□□□□ -0.23
TubP50586 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.61□□□□□ -0.23
TubP50586 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.61□□□□□ -0.23
TubP50586 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.61□□□□□ -0.23
TubP50586 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TubP50586 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.6□□□□□ -0.23
TubP50586 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.6□□□□□ -0.23
TubP50586 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TubP50586 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TubP50586 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.6□□□□□ -0.23
TubP50586 Gm8602-201ENSMUST00000184045 607 ntBASIC13.6□□□□□ -0.23
TubP50586 Gm27486-201ENSMUST00000184923 80 ntBASIC13.6□□□□□ -0.23
TubP50586 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.6□□□□□ -0.23
TubP50586 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.6□□□□□ -0.23
TubP50586 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.6□□□□□ -0.23
TubP50586 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.6□□□□□ -0.23
TubP50586 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
TubP50586 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.6□□□□□ -0.23
TubP50586 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TubP50586 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TubP50586 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.59□□□□□ -0.23
TubP50586 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.59□□□□□ -0.23
TubP50586 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TubP50586 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TubP50586 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TubP50586 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TubP50586 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TubP50586 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TubP50586 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TubP50586 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TubP50586 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.59□□□□□ -0.23
TubP50586 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms