Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Gm14832-201ENSMUST00000121289 322 ntBASIC14.62□□□□□ -0.07
Brca1P48754 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.62□□□□□ -0.07
Brca1P48754 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Brca1P48754 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brca1P48754 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.61□□□□□ -0.07
Brca1P48754 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.61□□□□□ -0.07
Brca1P48754 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.61□□□□□ -0.07
Brca1P48754 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Brca1P48754 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.61□□□□□ -0.07
Brca1P48754 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Brca1P48754 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Brca1P48754 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Brca1P48754 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Brca1P48754 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Brca1P48754 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.61□□□□□ -0.07
Brca1P48754 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.61□□□□□ -0.07
Brca1P48754 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Brca1P48754 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.61□□□□□ -0.07
Brca1P48754 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Brca1P48754 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.6□□□□□ -0.07
Brca1P48754 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.6□□□□□ -0.07
Brca1P48754 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.6□□□□□ -0.07
Brca1P48754 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Brca1P48754 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.6□□□□□ -0.07
Brca1P48754 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Gm32999-201ENSMUST00000192693 562 ntBASIC14.6□□□□□ -0.07
Brca1P48754 Gm17812-201ENSMUST00000204935 318 ntBASIC14.6□□□□□ -0.07
Brca1P48754 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.6□□□□□ -0.07
Brca1P48754 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.6□□□□□ -0.07
Brca1P48754 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Brca1P48754 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.6□□□□□ -0.07
Brca1P48754 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.6□□□□□ -0.07
Brca1P48754 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Brca1P48754 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Brca1P48754 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.59□□□□□ -0.07
Brca1P48754 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.59□□□□□ -0.07
Brca1P48754 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Brca1P48754 Gm12058-201ENSMUST00000118614 437 ntBASIC14.59□□□□□ -0.07
Brca1P48754 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.59□□□□□ -0.07
Brca1P48754 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Brca1P48754 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Brca1P48754 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Brca1P48754 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms