Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.24□□□□□ -0.61
Hist1h1dP43277 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Gm44344-201ENSMUST00000200287 129 ntBASIC11.24□□□□□ -0.61
Hist1h1dP43277 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.24□□□□□ -0.61
Hist1h1dP43277 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hist1h1dP43277 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.23□□□□□ -0.61
Hist1h1dP43277 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm24513-201ENSMUST00000174964 138 ntBASIC11.23□□□□□ -0.61
Hist1h1dP43277 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm27397-201ENSMUST00000184997 107 ntBASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm43703-201ENSMUST00000200523 763 ntBASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.23□□□□□ -0.61
Hist1h1dP43277 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.23□□□□□ -0.61
Hist1h1dP43277 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1dP43277 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h1dP43277 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms