Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx2P43241 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.56□□□□□ -0.4
Cdx2P43241 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdx2P43241 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.56□□□□□ -0.4
Cdx2P43241 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdx2P43241 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Cdx2P43241 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdx2P43241 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdx2P43241 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdx2P43241 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Gm14017-201ENSMUST00000121934 386 ntBASIC12.56□□□□□ -0.4
Cdx2P43241 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdx2P43241 Gm24990-201ENSMUST00000157406 323 ntBASIC12.56□□□□□ -0.4
Cdx2P43241 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdx2P43241 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.56□□□□□ -0.4
Cdx2P43241 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdx2P43241 Gm45186-201ENSMUST00000206874 478 ntBASIC12.56□□□□□ -0.4
Cdx2P43241 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdx2P43241 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.56□□□□□ -0.4
Cdx2P43241 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Cdx2P43241 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.56□□□□□ -0.4
Cdx2P43241 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdx2P43241 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdx2P43241 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdx2P43241 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.55□□□□□ -0.4
Cdx2P43241 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.55□□□□□ -0.4
Cdx2P43241 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdx2P43241 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdx2P43241 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.55□□□□□ -0.4
Cdx2P43241 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.55□□□□□ -0.4
Cdx2P43241 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdx2P43241 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdx2P43241 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdx2P43241 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdx2P43241 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdx2P43241 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdx2P43241 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Cdx2P43241 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdx2P43241 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cdx2P43241 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdx2P43241 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdx2P43241 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms