Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm17826-201ENSMUST00000189720 798 ntBASIC13.74□□□□□ -0.21
HttP42859 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HttP42859 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HttP42859 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Gm25881-201ENSMUST00000157783 103 ntBASIC13.74□□□□□ -0.21
HttP42859 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.74□□□□□ -0.21
HttP42859 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.74□□□□□ -0.21
HttP42859 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
HttP42859 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HttP42859 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
HttP42859 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
HttP42859 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Gm13809-201ENSMUST00000117921 597 ntBASIC13.73□□□□□ -0.21
HttP42859 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
HttP42859 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HttP42859 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.73□□□□□ -0.21
HttP42859 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.73□□□□□ -0.21
HttP42859 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Gm270-201ENSMUST00000223010 976 ntBASIC13.73□□□□□ -0.21
HttP42859 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.73□□□□□ -0.21
HttP42859 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.73□□□□□ -0.21
HttP42859 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HttP42859 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.73□□□□□ -0.21
HttP42859 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.73□□□□□ -0.21
HttP42859 Gm1848-201ENSMUST00000120711 789 ntBASIC13.73□□□□□ -0.21
HttP42859 Gm14585-201ENSMUST00000120713 634 ntBASIC13.73□□□□□ -0.21
HttP42859 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.73□□□□□ -0.21
HttP42859 Gm37299-201ENSMUST00000193951 826 ntBASIC13.73□□□□□ -0.21
HttP42859 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.73□□□□□ -0.21
HttP42859 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HttP42859 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HttP42859 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HttP42859 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HttP42859 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.72□□□□□ -0.21
HttP42859 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Gm13182-201ENSMUST00000122241 312 ntBASIC13.72□□□□□ -0.21
HttP42859 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.72□□□□□ -0.21
HttP42859 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.72□□□□□ -0.21
HttP42859 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.72□□□□□ -0.21
HttP42859 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.72□□□□□ -0.21
HttP42859 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.72□□□□□ -0.21
HttP42859 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HttP42859 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms