Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox6P40645 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox6P40645 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.49□□□□□ -0.41
Sox6P40645 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox6P40645 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.49□□□□□ -0.41
Sox6P40645 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.49□□□□□ -0.41
Sox6P40645 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox6P40645 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sox6P40645 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox6P40645 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sox6P40645 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox6P40645 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.48□□□□□ -0.41
Sox6P40645 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox6P40645 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox6P40645 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox6P40645 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox6P40645 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.48□□□□□ -0.41
Sox6P40645 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sox6P40645 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.48□□□□□ -0.41
Sox6P40645 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sox6P40645 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox6P40645 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.48□□□□□ -0.41
Sox6P40645 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox6P40645 Gm27838-201ENSMUST00000184829 128 ntBASIC12.48□□□□□ -0.41
Sox6P40645 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.48□□□□□ -0.41
Sox6P40645 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.48□□□□□ -0.41
Sox6P40645 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox6P40645 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox6P40645 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Sox6P40645 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.48□□□□□ -0.41
Sox6P40645 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sox6P40645 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.48□□□□□ -0.41
Sox6P40645 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox6P40645 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.47□□□□□ -0.41
Sox6P40645 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox6P40645 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox6P40645 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox6P40645 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Gm29741-201ENSMUST00000192667 421 ntBASIC12.47□□□□□ -0.41
Sox6P40645 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox6P40645 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox6P40645 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox6P40645 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox6P40645 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.47□□□□□ -0.41
Sox6P40645 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.47□□□□□ -0.41
Sox6P40645 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms