Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cxcl12P40224 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cxcl12P40224 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cxcl12P40224 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cxcl12P40224 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.58□□□□□ -0.24
Cxcl12P40224 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Snord83b-201ENSMUST00000104546 94 ntBASIC13.58□□□□□ -0.24
Cxcl12P40224 Gm12058-201ENSMUST00000118614 437 ntBASIC13.58□□□□□ -0.24
Cxcl12P40224 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.58□□□□□ -0.24
Cxcl12P40224 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cxcl12P40224 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.58□□□□□ -0.24
Cxcl12P40224 Gm5051-201ENSMUST00000204085 485 ntBASIC13.58□□□□□ -0.24
Cxcl12P40224 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.58□□□□□ -0.24
Cxcl12P40224 Gm45433-201ENSMUST00000209386 247 ntBASIC13.58□□□□□ -0.24
Cxcl12P40224 Spcs1-203ENSMUST00000226374 592 ntBASIC13.58□□□□□ -0.24
Cxcl12P40224 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cxcl12P40224 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.58□□□□□ -0.24
Cxcl12P40224 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.58□□□□□ -0.24
Cxcl12P40224 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cxcl12P40224 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cxcl12P40224 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cxcl12P40224 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm9062-201ENSMUST00000117712 727 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm13492-201ENSMUST00000119772 665 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm12266-201ENSMUST00000120311 962 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm13813-201ENSMUST00000120998 787 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.57□□□□□ -0.24
Cxcl12P40224 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm44545-201ENSMUST00000208262 746 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm8913-201ENSMUST00000209491 641 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.57□□□□□ -0.24
Cxcl12P40224 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Gm22058-201ENSMUST00000083393 310 ntBASIC13.57□□□□□ -0.24
Cxcl12P40224 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cxcl12P40224 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cxcl12P40224 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cxcl12P40224 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm13296-201ENSMUST00000117854 997 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm15131-201ENSMUST00000119124 595 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm25043-201ENSMUST00000158604 212 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Gm17040-202ENSMUST00000170597 889 ntBASIC13.56□□□□□ -0.24
Cxcl12P40224 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms