Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Mir671-201ENSMUST00000102432 98 ntBASIC19.45■□□□□ 0.7
Chd1P40201 Ighv2-1-201ENSMUST00000170946 353 ntBASIC19.45■□□□□ 0.7
Chd1P40201 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC19.45■□□□□ 0.7
Chd1P40201 Gm6722-201ENSMUST00000221586 390 ntBASIC19.45■□□□□ 0.7
Chd1P40201 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC19.45■□□□□ 0.7
Chd1P40201 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC19.45■□□□□ 0.7
Chd1P40201 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chd1P40201 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Chd1P40201 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
Chd1P40201 Gm9072-201ENSMUST00000218390 1514 ntBASIC19.45■□□□□ 0.7
Chd1P40201 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC19.45■□□□□ 0.7
Chd1P40201 Gm23045-201ENSMUST00000175041 96 ntBASIC19.45■□□□□ 0.7
Chd1P40201 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC19.45■□□□□ 0.7
Chd1P40201 Mt1-202ENSMUST00000211807 1085 ntBASIC19.45■□□□□ 0.7
Chd1P40201 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Gm13384-201ENSMUST00000117166 1344 ntBASIC19.45■□□□□ 0.7
Chd1P40201 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd1P40201 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC19.44■□□□□ 0.7
Chd1P40201 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Chd1P40201 Gm28719-201ENSMUST00000187779 1757 ntBASIC19.44■□□□□ 0.7
Chd1P40201 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Chd1P40201 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Gm13394-201ENSMUST00000121658 1000 ntBASIC19.44■□□□□ 0.7
Chd1P40201 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC19.44■□□□□ 0.7
Chd1P40201 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC19.44■□□□□ 0.7
Chd1P40201 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC19.44■□□□□ 0.7
Chd1P40201 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd1P40201 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chd1P40201 Gm14724-201ENSMUST00000118400 537 ntBASIC19.43■□□□□ 0.7
Chd1P40201 Gm15725-201ENSMUST00000119947 1090 ntBASIC19.43■□□□□ 0.7
Chd1P40201 Gm23119-201ENSMUST00000158610 140 ntBASIC19.43■□□□□ 0.7
Chd1P40201 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Ighv4-2-201ENSMUST00000192975 362 ntBASIC19.43■□□□□ 0.7
Chd1P40201 Gm18636-201ENSMUST00000218846 1066 ntBASIC19.43■□□□□ 0.7
Chd1P40201 AC126799.1-201ENSMUST00000221976 246 ntBASIC19.43■□□□□ 0.7
Chd1P40201 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Chd1P40201 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC19.43■□□□□ 0.7
Chd1P40201 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chd1P40201 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Chd1P40201 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC19.43■□□□□ 0.7
Chd1P40201 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Chd1P40201 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Gm7049-201ENSMUST00000223520 1712 ntBASIC19.43■□□□□ 0.7
Chd1P40201 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd1P40201 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Gm44329-201ENSMUST00000197469 112 ntBASIC19.42■□□□□ 0.7
Chd1P40201 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chd1P40201 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chd1P40201 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chd1P40201 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chd1P40201 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms