Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.24□□□□□ -0.29
LdlrP35951 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.24□□□□□ -0.29
LdlrP35951 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.24□□□□□ -0.29
LdlrP35951 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.24□□□□□ -0.29
LdlrP35951 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.24□□□□□ -0.29
LdlrP35951 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.24□□□□□ -0.29
LdlrP35951 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.24□□□□□ -0.29
LdlrP35951 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.24□□□□□ -0.29
LdlrP35951 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.24□□□□□ -0.29
LdlrP35951 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.24□□□□□ -0.29
LdlrP35951 Gm9908-201ENSMUST00000211534 448 ntBASIC13.24□□□□□ -0.29
LdlrP35951 Gm46209-201ENSMUST00000217912 553 ntBASIC13.24□□□□□ -0.29
LdlrP35951 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.24□□□□□ -0.29
LdlrP35951 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LdlrP35951 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LdlrP35951 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LdlrP35951 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LdlrP35951 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.23□□□□□ -0.29
LdlrP35951 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LdlrP35951 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LdlrP35951 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
LdlrP35951 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
LdlrP35951 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LdlrP35951 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.23□□□□□ -0.29
LdlrP35951 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.23□□□□□ -0.29
LdlrP35951 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.23□□□□□ -0.29
LdlrP35951 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.23□□□□□ -0.29
LdlrP35951 Mir7085-201ENSMUST00000184353 66 ntBASIC13.23□□□□□ -0.29
LdlrP35951 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LdlrP35951 Gm18062-201ENSMUST00000208020 547 ntBASIC13.23□□□□□ -0.29
LdlrP35951 Gm18055-201ENSMUST00000208254 547 ntBASIC13.23□□□□□ -0.29
LdlrP35951 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.23□□□□□ -0.29
LdlrP35951 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LdlrP35951 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LdlrP35951 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LdlrP35951 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.23□□□□□ -0.29
LdlrP35951 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LdlrP35951 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.23□□□□□ -0.29
LdlrP35951 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LdlrP35951 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.22□□□□□ -0.29
LdlrP35951 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.22□□□□□ -0.29
LdlrP35951 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.22□□□□□ -0.29
LdlrP35951 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.22□□□□□ -0.29
LdlrP35951 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.22□□□□□ -0.29
LdlrP35951 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LdlrP35951 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LdlrP35951 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.22□□□□□ -0.29
LdlrP35951 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Gm12091-201ENSMUST00000146791 830 ntBASIC13.22□□□□□ -0.29
LdlrP35951 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LdlrP35951 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LdlrP35951 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.22□□□□□ -0.29
LdlrP35951 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LdlrP35951 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LdlrP35951 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LdlrP35951 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms