Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Foxa1P35582 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.28□□□□□ -0.44
Foxa1P35582 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Foxa1P35582 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Foxa1P35582 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxa1P35582 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.27□□□□□ -0.44
Foxa1P35582 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Foxa1P35582 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Foxa1P35582 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.27□□□□□ -0.44
Foxa1P35582 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Foxa1P35582 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Foxa1P35582 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Mir874-201ENSMUST00000104769 76 ntBASIC12.27□□□□□ -0.45
Foxa1P35582 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Foxa1P35582 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.27□□□□□ -0.45
Foxa1P35582 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Gm38671-201ENSMUST00000200573 130 ntBASIC12.27□□□□□ -0.45
Foxa1P35582 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.27□□□□□ -0.45
Foxa1P35582 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Foxa1P35582 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Foxa1P35582 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.27□□□□□ -0.45
Foxa1P35582 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Foxa1P35582 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Foxa1P35582 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxa1P35582 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.26□□□□□ -0.45
Foxa1P35582 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Foxa1P35582 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Foxa1P35582 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Gm7287-201ENSMUST00000205267 602 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.26□□□□□ -0.45
Foxa1P35582 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Gm5356-201ENSMUST00000093326 615 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.26□□□□□ -0.45
Foxa1P35582 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Foxa1P35582 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms