Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.84□□□□□ -0.19
H2afxP27661 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afxP27661 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
H2afxP27661 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
H2afxP27661 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.83□□□□□ -0.19
H2afxP27661 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
H2afxP27661 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
H2afxP27661 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.83□□□□□ -0.2
H2afxP27661 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
H2afxP27661 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.83□□□□□ -0.2
H2afxP27661 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.83□□□□□ -0.2
H2afxP27661 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
H2afxP27661 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
H2afxP27661 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
H2afxP27661 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.83□□□□□ -0.2
H2afxP27661 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.83□□□□□ -0.2
H2afxP27661 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
H2afxP27661 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
H2afxP27661 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.83□□□□□ -0.2
H2afxP27661 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.83□□□□□ -0.2
H2afxP27661 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
H2afxP27661 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.83□□□□□ -0.2
H2afxP27661 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.83□□□□□ -0.2
H2afxP27661 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H2afxP27661 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
H2afxP27661 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.82□□□□□ -0.2
H2afxP27661 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
H2afxP27661 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
H2afxP27661 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
H2afxP27661 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.82□□□□□ -0.2
H2afxP27661 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
H2afxP27661 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Gm6222-201ENSMUST00000120787 396 ntBASIC13.82□□□□□ -0.2
H2afxP27661 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.82□□□□□ -0.2
H2afxP27661 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Rpph1-201ENSMUST00000175096 319 ntBASIC13.82□□□□□ -0.2
H2afxP27661 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.82□□□□□ -0.2
H2afxP27661 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.82□□□□□ -0.2
H2afxP27661 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
H2afxP27661 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.82□□□□□ -0.2
H2afxP27661 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H2afxP27661 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H2afxP27661 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afxP27661 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afxP27661 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afxP27661 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
H2afxP27661 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms