Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.45□□□□□ -0.42
Clk1P22518 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.45□□□□□ -0.42
Clk1P22518 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Clk1P22518 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Auts2-212ENSMUST00000178555 309 ntBASIC12.45□□□□□ -0.42
Clk1P22518 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.45□□□□□ -0.42
Clk1P22518 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Clk1P22518 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.45□□□□□ -0.42
Clk1P22518 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Clk1P22518 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clk1P22518 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clk1P22518 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.45□□□□□ -0.42
Clk1P22518 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clk1P22518 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.44□□□□□ -0.42
Clk1P22518 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.44□□□□□ -0.42
Clk1P22518 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clk1P22518 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
Clk1P22518 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Gm15321-201ENSMUST00000121290 288 ntBASIC12.44□□□□□ -0.42
Clk1P22518 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.44□□□□□ -0.42
Clk1P22518 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.44□□□□□ -0.42
Clk1P22518 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.44□□□□□ -0.42
Clk1P22518 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.44□□□□□ -0.42
Clk1P22518 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.44□□□□□ -0.42
Clk1P22518 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Clk1P22518 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.44□□□□□ -0.42
Clk1P22518 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clk1P22518 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.44□□□□□ -0.42
Clk1P22518 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Clk1P22518 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Clk1P22518 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.44□□□□□ -0.42
Clk1P22518 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clk1P22518 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Clk1P22518 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Clk1P22518 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.43□□□□□ -0.42
Clk1P22518 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Clk1P22518 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Clk1P22518 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.43□□□□□ -0.42
Clk1P22518 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clk1P22518 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms